My talk will be focused on signaling network and targeted therapy for cancer. I will talk about our systems biology approach where we integrate functional proteomics, biochemistry, and computational modeling to understand and target signaling network for therapy. Specifically I will focus on our ongoing ODE model reduction work on the MAPK network, and how signals are processed through network motifs to regulate the duration of MAPK activity in melanoma. I will also discuss identification of feedback loops and how these loops alter responses of targeted therapeutics in breast cancer. Using reverse phase protein microarrays we can simultaneously probe for the phosphorylation changes in a large number of proteins. Coupling this technology with signaling petri-net models we can identify and target regulatory loops using combination targeted therapy.