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The Institute for Theoretical and Engineering Science
Department of Mathematics, University of Houston




Joint Scientific Computing & Nonlinear Dynamics Seminar




Professor Gabriel Wittum
Simulation in Technology
University of Heidelberg

Towards Simulation of Neuronal Signal Processing

Tuesday, November 30$ ^*$
2:30 PM- 3:30 PM
Room 634 S&R1

$ ^*$Note: Special Date and Time

Abstract: The crucial feature of neuronal ensembles is their high complexity and variability. This makes modelling and computation very difficult, in particular for detailed models based on first principles. The problem starts with modelling geometry, which has to extract the essential features from those highly complex and variable phenotypes and at the same time has to take in to account the stochastic variability. Moreover, models of the highly complex processes which are living on these geometries are far from being well established, since those are highly complex too and couple on a hierarchy of scales in space and time. Simulating such systems always puts the whole approach to test, including modeling, numerical methods and software implementations. In combination with validation based on experimental data, all components have to be enhanced to reach a reliable solving strategy. To handle problems of this complexity, new mathematical methods and software tools are required. In recent years, new approaches such as parallel adaptive multigrid methods and corresponding software tools have been developed allowing to treat problems of huge complexity. In the lecture we present an approach for the simulation of signal processing in neurons. This is an outline of work to be done in this highly complex field. Part of this approach is a method to reconstruct the geometric structure of neurons from data measured by 2-photon microscopy in vivo. Being able to reconstruct neural geometries and network connectivities from in vivo measured data is the basis of understanding coding of motoric perceptions and long term plasticity which is one of the main topics of neuroscience. Other issues are compartment models and upscaling.

This seminar is easily accessible to persons with disabilities. For more information or for assistance, please contact the Mathematics Department at 743-3500.




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Tsorng-Whay Pan 2004-11-22