Mock Version: 1.2.14
ENTER do(['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target x86_64 --nodeps /builddir/build/SPECS/R-biglm.spec'], shell=Falseenv={'HOME': '/builddir', 'PROMPT_COMMAND': 'printf "\x1b]0;<mock-chroot>\x07<mock-chroot>"', 'HOSTNAME': 'mock', 'CCACHE_DIR': '/tmp/ccache', 'SHELL': '/bin/bash', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'LANG': 'en_US.UTF-8', 'CCACHE_UMASK': '002', 'TERM': 'vt100'}uid=7225user='mockbuild'chrootPath='/scratch/mock/epel-5-x86_64-515/root'logger=<mockbuild.trace_decorator.getLog object at 0x7fc0b24479e8>gid=135timeout=0printOutput=False)
Executing command: ['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target x86_64 --nodeps /builddir/build/SPECS/R-biglm.spec'] with env {'HOME': '/builddir', 'PROMPT_COMMAND': 'printf "\x1b]0;<mock-chroot>\x07<mock-chroot>"', 'HOSTNAME': 'mock', 'CCACHE_DIR': '/tmp/ccache', 'SHELL': '/bin/bash', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'LANG': 'en_US.UTF-8', 'CCACHE_UMASK': '002', 'TERM': 'vt100'} and shell False
Building target platforms: x86_64
Building for target x86_64
Wrote: /builddir/build/SRPMS/R-biglm-0.4-1.el5.centos.1.src.rpm
Child return code was: 0
LEAVE do --> 

ENTER do(['bash', '--login', '-c', '/usr/bin/rpmbuild -bb --target x86_64 --nodeps  /builddir/build/SPECS/R-biglm.spec '], private_network=Trueenv={'HOME': '/builddir', 'PROMPT_COMMAND': 'printf "\x1b]0;<mock-chroot>\x07<mock-chroot>"', 'HOSTNAME': 'mock', 'CCACHE_DIR': '/tmp/ccache', 'SHELL': '/bin/bash', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'LANG': 'en_US.UTF-8', 'CCACHE_UMASK': '002', 'TERM': 'vt100'}uid=7225user='mockbuild'chrootPath='/scratch/mock/epel-5-x86_64-515/root'logger=<mockbuild.trace_decorator.getLog object at 0x7fc0b24479e8>gid=135timeout=0printOutput=Falseshell=False)
Executing command: ['bash', '--login', '-c', '/usr/bin/rpmbuild -bb --target x86_64 --nodeps  /builddir/build/SPECS/R-biglm.spec '] with env {'HOME': '/builddir', 'PROMPT_COMMAND': 'printf "\x1b]0;<mock-chroot>\x07<mock-chroot>"', 'HOSTNAME': 'mock', 'CCACHE_DIR': '/tmp/ccache', 'SHELL': '/bin/bash', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'LANG': 'en_US.UTF-8', 'CCACHE_UMASK': '002', 'TERM': 'vt100'} and shell False
Building target platforms: x86_64
Building for target x86_64
Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.68371
+ umask 022
+ cd /builddir/build/BUILD
+ LANG=C
+ export LANG
+ unset DISPLAY
+ cd /builddir/build/BUILD
+ rm -rf biglm
+ /bin/mkdir -p biglm
+ cd biglm
+ /bin/gzip -dc /builddir/build/SOURCES/biglm_0.4.tar.gz
+ tar -xf -
+ STATUS=0
+ '[' 0 -ne 0 ']'
++ /usr/bin/id -u
+ '[' 7225 = 0 ']'
++ /usr/bin/id -u
+ '[' 7225 = 0 ']'
+ /bin/chmod -Rf a+rX,u+w,g-w,o-w .
+ exit 0
Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.68371
+ umask 022
+ cd /builddir/build/BUILD
+ cd biglm
+ LANG=C
+ export LANG
+ unset DISPLAY
+ exit 0
Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.68371
+ umask 022
+ cd /builddir/build/BUILD
+ cd biglm
+ LANG=C
+ export LANG
+ unset DISPLAY
+ /bin/rm -rf /var/tmp/R-biglm-0.4-1.el5.centos.1-root-mockbuild
+ mkdir -p /var/tmp/R-biglm-0.4-1.el5.centos.1-root-mockbuild/usr/lib64/R/library
+ /usr/bin/R CMD INSTALL biglm -l /var/tmp/R-biglm-0.4-1.el5.centos.1-root-mockbuild/usr/lib64/R/library
* installing *source* package 'biglm' ...
** libs
gcc -m64 -std=gnu99 -I/usr/include/R -DNDEBUG  -I/usr/local/include    -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic  -c boundedQR.c -o boundedQR.o
gfortran -m64   -fpic  -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic  -c boundedQRf.f -o boundedQRf.o
gcc -m64 -std=gnu99 -shared -L/usr/lib64/R/lib -L/usr/local/lib64 -o biglm.so boundedQR.o boundedQRf.o -lgfortran -lm -L/usr/lib64/R/lib -lR
installing to /var/tmp/R-biglm-0.4-1.el5.centos.1-root-mockbuild/usr/lib64/R/library/biglm/libs
** R
** preparing package for lazy loading
** help
*** installing help indices
  converting help for package 'biglm'
    finding HTML links ... done
    bigglm                                  html  
    biglm                                   html  
** building package indices
** testing if installed package can be loaded
* DONE (biglm)
+ test -d biglm/src
+ cd biglm/src
+ rm -f boundedQR.o boundedQRf.o biglm.so
+ /bin/rm -rf /var/tmp/R-biglm-0.4-1.el5.centos.1-root-mockbuild/usr/lib64/R/library/R.css
+ /usr/lib/rpm/find-debuginfo.sh /builddir/build/BUILD/biglm
extracting debug info from /var/tmp/R-biglm-0.4-1.el5.centos.1-root-mockbuild/usr/lib64/R/library/biglm/libs/biglm.so
16 blocks
+ /usr/lib/rpm/redhat/brp-compress
+ /usr/lib/rpm/redhat/brp-strip-static-archive /usr/bin/strip
+ /usr/lib/rpm/redhat/brp-strip-comment-note /usr/bin/strip /usr/bin/objdump
+ /usr/lib/rpm/brp-python-bytecompile
+ /usr/lib/rpm/redhat/brp-java-repack-jars
Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.2749
+ umask 022
+ cd /builddir/build/BUILD
+ cd biglm
+ /usr/bin/R CMD check biglm
* using log directory ‘/builddir/build/BUILD/biglm/biglm.Rcheck’
* using R version 3.2.3 (2015-12-10)
* using platform: x86_64-redhat-linux-gnu (64-bit)
* using session charset: UTF-8
* checking for file ‘biglm/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘biglm’ version ‘0.4’
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘biglm’ can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking DESCRIPTION meta-information ... NOTE
Malformed Description field: should contain one or more complete sentences.
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... NOTE
Call with DUP:
   .Fortran("regcf", as.integer(p), as.integer(p * p/2), bigQR$D, 
       bigQR$rbar, bigQR$thetab, bigQR$tol, beta = numeric(p), nreq = as.integer(nvar), 
       ier = integer(1), DUP = FALSE)
DUP is no longer supported and will be ignored.
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking compiled code ... OK
* checking examples ... OK
* checking PDF version of manual ... OK
* DONE
Status: 2 NOTEs
See
  ‘/builddir/build/BUILD/biglm/biglm.Rcheck/00check.log’
for details.
+ exit 0
Processing files: R-biglm-0.4-1.el5.centos.1
error: File not found: /var/tmp/R-biglm-0.4-1.el5.centos.1-root-mockbuild/usr/lib64/R/library/biglm/latex
error: File not found: /var/tmp/R-biglm-0.4-1.el5.centos.1-root-mockbuild/usr/lib64/R/library/biglm/man
error: File not found: /var/tmp/R-biglm-0.4-1.el5.centos.1-root-mockbuild/usr/lib64/R/library/biglm/CONTENTS
Processing files: R-biglm-debuginfo-0.4-1.el5.centos.1
error: File not found: /var/tmp/R-biglm-0.4-1.el5.centos.1-root-mockbuild/usr/lib64/R/library/biglm/R-ex
Provides: biglm.so.debug()(64bit)
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Checking for unpackaged file(s): /usr/lib/rpm/check-files /var/tmp/R-biglm-0.4-1.el5.centos.1-root-mockbuild
RPM build errors:
error: Installed (but unpackaged) file(s) found:
   /usr/lib64/R/library/biglm/NEWS
    File not found: /var/tmp/R-biglm-0.4-1.el5.centos.1-root-mockbuild/usr/lib64/R/library/biglm/latex
    File not found: /var/tmp/R-biglm-0.4-1.el5.centos.1-root-mockbuild/usr/lib64/R/library/biglm/man
    File not found: /var/tmp/R-biglm-0.4-1.el5.centos.1-root-mockbuild/usr/lib64/R/library/biglm/CONTENTS
    File not found: /var/tmp/R-biglm-0.4-1.el5.centos.1-root-mockbuild/usr/lib64/R/library/biglm/R-ex
    Installed (but unpackaged) file(s) found:
   /usr/lib64/R/library/biglm/NEWS
Child return code was: 1
EXCEPTION: Command failed. See logs for output.
 # bash --login -c /usr/bin/rpmbuild -bb --target x86_64 --nodeps  /builddir/build/SPECS/R-biglm.spec 
Traceback (most recent call last):
  File "/usr/lib/python3.4/site-packages/mockbuild/trace_decorator.py", line 84, in trace
    result = func(*args, **kw)
  File "/usr/lib/python3.4/site-packages/mockbuild/util.py", line 526, in do
    raise exception.Error("Command failed. See logs for output.\n # %s" % (command,), child.returncode)
mockbuild.exception.Error: Command failed. See logs for output.
 # bash --login -c /usr/bin/rpmbuild -bb --target x86_64 --nodeps  /builddir/build/SPECS/R-biglm.spec 
LEAVE do --> EXCEPTION RAISED